{
  "title": "18th Annual International Conference on Research in Computational Molecular Biology",
  "location": "Pittsburgh, PA, United States",
  "dates": "April 2 - 5, 2014",
  "pc_chair": "Roded Sharan",
  "organization_committee": "Panayiotis (Takis) Benos (co-chair), Russell Schwartz (co-chair)",
  "keynotes": "Ian T. Baldwin, Atul Butte, JJ Collins, Trey Ideker, Tom Mitchell, Sarah A. Tishkoff",
  "website": "https://recomb.org/recomb2014/",
  "papers": [
    {
      "author": "Derek Aguiar, Eric Morrow, Sorin Istrail",
      "title": "Tractatus: An Exact and Subquadratic Algorithm for Inferring Identical-by-Descent Multi-shared Haplotype Tracts",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 1-17, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "1-17",
      "proceedings_doi": "10.1007/978-3-319-05269-4_1"
    },
    {
      "author": "Emily Berger, Deniz Yorukoglu, Jian Peng, Bonnie Berger",
      "title": "HapTree: A Novel Bayesian Framework for Single Individual Polyplotyping Using NGS Data",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 18-19, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "18-19",
      "proceedings_doi": "10.1007/978-3-319-05269-4_2",
      "journal": "PLoS Computational Biology",
      "journal_title": "HapTree: A Novel Bayesian Framework for Single Individual Polyplotyping Using NGS Data",
      "journal_authors": "Emily Berger, Deniz Yorukoglu, Jian Peng, Bonnie Berger",
      "journal_issue_pages": "10(3): e1003502",
      "journal_year": "2014",
      "journal_doi": "10.1371/journal.pcbi.1003502"
    },
    {
      "author": "Adam Bloniarz, Ameet Talwalkar, Jonathan Terhorst, Michael I. Jordan, David Patterson, Bin Yu, Yun S. Song",
      "title": "Changepoint Analysis for Efficient Variant Calling",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 20-34, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "20-34",
      "proceedings_doi": "10.1007/978-3-319-05269-4_3"
    },
    {
      "author": "Rayan Chikhi, Antoine Limasset, Shaun Jackman, Jared T. Simpson, Paul Medvedev",
      "title": "On the Representation of de Bruijn Graphs",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 35-55, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "35-55",
      "proceedings_doi": "10.1007/978-3-319-05269-4_4",
      "preprint_id": "arXiv:1401.5383",
      "preprint_doi": "10.48550/arXiv.1401.5383",
      "journal": "Journal of Computational Biology",
      "journal_title": "On the Representation of De Bruijn Graphs",
      "journal_authors": "Rayan Chikhi, Antoine Limasset, Shaun D. Jackman, Jared T. Simpson, Paul Medvedev",
      "journal_issue_pages": "22(5): 336-352",
      "journal_year": "2015",
      "journal_doi": "10.1089/cmb.2014.0160"
    },
    {
      "author": "Hamidreza Chitsaz and Mohammad Aminisharifabad",
      "title": "Exact Learning of RNA Energy Parameters from Structure",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 56-68, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "56-68",
      "proceedings_doi": "10.1007/978-3-319-05269-4_5",
      "journal": "Journal of Computational Biology",
      "journal_title": "Exact Learning of RNA Energy Parameters From Structure",
      "journal_authors": "Hamidreza Chitsaz, Mohammad Aminisharifabad",
      "journal_issue_pages": "22(6): 463-473",
      "journal_year": "2015",
      "journal_doi": "10.1089/cmb.2014.0164"
    },
    {
      "author": "Chen-Ping Fu, Vladimir Jojic, Leonard McMillan",
      "title": "An Alignment-Free Regression Approach for Estimating Allele-Specific Expression Using RNA-Seq Data",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 69-84, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "69-84",
      "proceedings_doi": "10.1007/978-3-319-05269-4_6"
    },
    {
      "author": "Adrian Guthals, Christina Boucher, Nuno Bandeira",
      "title": "The Generating Function Approach for Peptide Identification in Spectral Networks",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 85-99, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "85-99",
      "proceedings_doi": "10.1007/978-3-319-05269-4_7",
      "journal": "Journal of Computational Biology",
      "journal_title": "The Generating Function Approach for Peptide Identification in Spectral Networks",
      "journal_authors": "Adrian Guthals, Christina Boucher, Nuno Bandeira",
      "journal_issue_pages": "22(5): 353-366",
      "journal_year": "2014",
      "journal_doi": "10.1089/cmb.2014.0165"
    },
    {
      "author": "Kelley Harris, Sara Sheehan, John A. Kamm, Yun S. Song",
      "title": "Decoding Coalescent Hidden Markov Models in Linear Time",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 100-114, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "100-114",
      "proceedings_doi": "10.1007/978-3-319-05269-4_8",
      "preprint_id": "arXiv:1403.0858",
      "preprint_doi": "10.48550/arXiv.1403.0858"
    },
    {
      "author": "Jan Hoinka, Alexey Berezhnoy, Zuben E. Sauna, Eli Gilboa, Teresa M. Przytycka",
      "title": "AptaCluster - A Method to Cluster HT-SELEX Aptamer Pools and Lessons from Its Application",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 115-128, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "115-128",
      "proceedings_doi": "10.1007/978-3-319-05269-4_9"
    },
    {
      "author": "Hetunandan Kamisetty, Bornika Ghosh, Christopher James Langmead, Chris Bailey-Kellogg",
      "title": "Learning Sequence Determinants of Protein: Protein Interaction Specificity with Sparse Graphical Models",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 129-143, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "129-143",
      "proceedings_doi": "10.1007/978-3-319-05269-4_10",
      "journal": "Journal of Computational Biology",
      "journal_title": "Learning Sequence Determinants of Protein:Protein Interaction Specificity with Sparse Graphical Models",
      "journal_authors": "Hetunandan Kamisetty, Bornika Ghosh, Christopher J. Langmead, Chris Bailey‐Kellogg",
      "journal_issue_pages": "22(6): 474-486",
      "journal_year": "2015",
      "journal_doi": "10.1089/cmb.2014.0289"
    },
    {
      "author": "Arun S. Konagurthu, Parthan Kasarapu, Lloyd Allison, James H. Collier, Arthur M. Lesk",
      "title": "On Sufficient Statistics of Least-Squares Superposition of Vector Sets",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 144-159, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "144-159",
      "proceedings_doi": "10.1007/978-3-319-05269-4_11",
      "journal": "Journal of Computational Biology",
      "journal_title": "On Sufficient Statistics of Least-Squares Superposition of Vector Sets",
      "journal_authors": "Arun S. Konagurthu, Parthan Kasarapu, Lloyd Allison, James H. Collier, Arthur M. Lesk",
      "journal_issue_pages": "22(6): 487-497",
      "journal_year": "2015",
      "journal_doi": "10.1089/cmb.2014.0154"
    },
    {
      "author": "Henry C.M. Leung, S.M. Yiu, Francis Y.L. Chin",
      "title": "IDBA-MTP: A Hybrid Meta Transcriptomic Assembler Based on Protein Information",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 160-172, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "160-172",
      "proceedings_doi": "10.1007/978-3-319-05269-4_12",
      "journal": "Journal of Computational Biology",
      "journal_title": "IDBA-MTP: A Hybrid Metatranscriptomic Assembler Based on Protein Information",
      "journal_authors": "Henry C. M. Leung, Siu‐Ming Yiu, Francis Y. L. Chin",
      "journal_issue_pages": "22(5): 367-376",
      "journal_year": "2014",
      "journal_doi": "10.1089/cmb.2014.0139"
    },
    {
      "author": "Jianzhu Ma, Sheng Wang, Zhiyong Wang, Jinbo Xu",
      "title": "MRFalign: Protein Homology Detection through Alignment of Markov Random Fields",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 173-174, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "173-174",
      "proceedings_doi": "10.1007/978-3-319-05269-4_13",
      "journal": "PLoS Computational Biology",
      "journal_title": "MRFalign: Protein Homology Detection through Alignment of Markov Random Fields",
      "journal_authors": "Jianzhu Ma, Sheng Wang, Zhiyong Wang, Jinbo Xu",
      "journal_issue_pages": "10(3): e1003500",
      "journal_year": "2014",
      "journal_doi": "10.1371/journal.pcbi.1003500"
    },
    {
      "author": "Shaun Mahony, Matthew D. Edwards, Esteban O. Mazzoni, Richard I. Sherwood, Akshay Kakumanu, Carolyn A. Morrison, Hynek Wichterle, David K. Gifford",
      "title": "An Integrated Model of Multiple-Condition ChIP-Seq Data Reveals Predeterminants of Cdx2 Binding",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 175-176, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "175-176",
      "proceedings_doi": "10.1007/978-3-319-05269-4_14",
      "journal": "PLoS Computational Biology",
      "journal_title": "An Integrated Model of Multiple-Condition ChIP-Seq Data Reveals Predeterminants of Cdx2 Binding",
      "journal_authors": "Shaun Mahony, Matthew D. Edwards, Esteban O. Mazzoni, Richard I. Sherwood, Akshay Kakumanu, Carolyn A. Morrison, Hynek Wichterle, David K. Gifford",
      "journal_issue_pages": "10(3): e1003501",
      "journal_year": "2014",
      "journal_doi": "10.1371/journal.pcbi.1003501"
    },
    {
      "author": "Siavash Mirarab, Nam Nguyen, Tandy Warnow",
      "title": "PASTA: Ultra-Large Multiple Sequence Alignment",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 177-191, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "177-191",
      "proceedings_doi": "10.1007/978-3-319-05269-4_15",
      "journal": "Journal of Computational Biology",
      "journal_title": "PASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid Sequences",
      "journal_authors": "Siavash Mirarab, Nam Nguyen, Sheng Guo, Li‐San Wang, Junhyong Kim, Tandy Warnow",
      "journal_issue_pages": "22(5): 377-386",
      "journal_year": "2014",
      "journal_doi": "10.1089/cmb.2014.0156"
    },
    {
      "author": "Arne C. Müller, Frank J. Bruggeman, Brett G. Olivier, Leen Stougie",
      "title": "Fast Flux Module Detection Using Matroid Theory",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 192-206, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "192-206",
      "proceedings_doi": "10.1007/978-3-319-05269-4_16",
      "journal": "Journal of Computational Biology",
      "journal_title": "Fast Flux Module Detection Using Matroid Theory",
      "journal_authors": "Arne C. Reimers, Frank J. Bruggeman, Brett G. Olivier, Leen Stougie",
      "journal_issue_pages": "22(5): 414-424",
      "journal_year": "2015",
      "journal_doi": "10.1089/cmb.2014.0141"
    },
    {
      "author": "Ngan Nguyen, Glenn Hickey, Daniel R. Zerbino, Brian Raney, Dent Earl, Joel Armstrong, David Haussler, Benedict Paten",
      "title": "Building a Pangenome Reference for a Population",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 207-221, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "207-221",
      "proceedings_doi": "10.1007/978-3-319-05269-4_17",
      "journal": "Journal of Computational Biology",
      "journal_title": "Building a Pan-Genome Reference for a Population",
      "journal_authors": "Ngan Nguyen, Glenn Hickey, Daniel R. Zerbino, Brian J. Raney, Dent Earl, Joel Armstrong, W. James Kent, David Haussler, Benedict Paten",
      "journal_issue_pages": "22(5): 387-401",
      "journal_year": "2015",
      "journal_doi": "10.1089/cmb.2014.0146"
    },
    {
      "author": "Keith Noto, Carla Brodley, Saeed Majidi, Diana W. Bianchi, Donna K. Slonim",
      "title": "CSAX: Characterizing Systematic Anomalies in eXpression Data",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 222-236, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "222-236",
      "proceedings_doi": "10.1007/978-3-319-05269-4_18",
      "journal": "Journal of Computational Biology",
      "journal_title": "CSAX: Characterizing Systematic Anomalies in eXpression Data",
      "journal_authors": "Keith Noto, Saeed Majidi, Andrea G. Edlow, Heather C. Wick, Diana W. Bianchi, Donna K. Slonim",
      "journal_issue_pages": "22(5): 402-413",
      "journal_year": "2015",
      "journal_doi": "10.1089/cmb.2014.0155"
    },
    {
      "author": "Murray Patterson, Tobias Marschall, Nadia Pisanti, Leo van Iersel, Leen Stougie, Gunnar W. Klau, Alexander Schönhuth",
      "title": "WHATSHAP: Haplotype Assembly for Future-Generation Sequencing Reads",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 237-249, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "237-249",
      "proceedings_doi": "10.1007/978-3-319-05269-4_19",
      "preprint_id": "bioRxiv 085050",
      "preprint_doi": "10.1101/085050",
      "journal": "Journal of Computational Biology",
      "journal_title": "WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads",
      "journal_authors": "Murray Patterson, Tobias Marschall, Nadia Pisanti, Leo van Iersel, Leen Stougie, Gunnar W. Klau, Alexander Schönhuth",
      "journal_issue_pages": "22(6): 498-509",
      "journal_year": "2015",
      "journal_doi": "10.1089/cmb.2014.0157"
    },
    {
      "author": "Benjamin J. Raphael and Fabio Vandin",
      "title": "Simultaneous Inference of Cancer Pathways and Tumor Progression from Cross-Sectional Mutation Data",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 250-264, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "250-264",
      "proceedings_doi": "10.1007/978-3-319-05269-4_20",
      "journal": "Journal of Computational Biology",
      "journal_title": "Simultaneous Inference of Cancer Pathways and Tumor Progression from Cross-Sectional Mutation Data",
      "journal_authors": "Benjamin J. Raphael, Fabio Vandin",
      "journal_issue_pages": "22(6): 510-527",
      "journal_year": "2015",
      "journal_doi": "10.1089/cmb.2014.0161"
    },
    {
      "author": "Yana Safonova, Anton Bankevich, Pavel A. Pevzner",
      "title": "DIPSPADES: Assembler for Highly Polymorphic Diploid Genomes",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 265-279, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "265-279",
      "proceedings_doi": "10.1007/978-3-319-05269-4_21",
      "journal": "Journal of Computational Biology",
      "journal_title": "dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes",
      "journal_authors": "Yana Safonova, Anton Bankevich, Pavel A. Pevzner",
      "journal_issue_pages": "22(6): 528-545",
      "journal_year": "2015",
      "journal_doi": "10.1089/cmb.2014.0153"
    },
    {
      "author": "Mingfu Shao, Yu Lin, Bernard Moret",
      "title": "An Exact Algorithm to Compute the DCJ Distance for Genomes with Duplicate Genes",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 280-292, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "280-292",
      "proceedings_doi": "10.1007/978-3-319-05269-4_22",
      "journal": "Journal of Computational Biology",
      "journal_title": "An Exact Algorithm to Compute the Double-Cut-and-Join Distance for Genomes with Duplicate Genes",
      "journal_authors": "Mingfu Shao, Yu Lin, Bernard M. E. Moret",
      "journal_issue_pages": "22(5): 425-435",
      "journal_year": "2014",
      "journal_doi": "10.1089/cmb.2014.0096"
    },
    {
      "author": "Raunak Shrestha, Ermin Hodzic, Jake Yeung, Kendric Wang, Thomas Sauerwald, Phuong Dao, Shawn Anderson, Himisha Beltran, Mark A. Rubin, Colin C. Collins, Gholamreza Haffari, S. Cenk Sahinalp",
      "title": "HIT'nDRIVE: Multidriver -Gene Prioritization Based on Hitting Time",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 293-306, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "293-306",
      "proceedings_doi": "10.1007/978-3-319-05269-4_23",
      "journal": "Genome Research",
      "journal_title": "HIT'nDRIVE: patient-specific multidriver gene prioritization for precision oncology",
      "journal_authors": "Raunak Shrestha, Ermin Hodzic, Thomas Sauerwald, Phuong Dao, Kendric Wang, Jake Yeung, Shawn Anderson, Fabio Vandin, Gholamreza Haffari, Colin C. Collins, S. Cenk Sahinalp",
      "journal_issue_pages": "27(9): 1573-1588",
      "journal_year": "2017",
      "journal_doi": "10.1101/gr.221218.117"
    },
    {
      "author": "Ewa Szczurek and Niko Beerenwinkel",
      "title": "Modeling Mutual Exclusivity of Cancer Mutations",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 307-308, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "307-308",
      "proceedings_doi": "10.1007/978-3-319-05269-4_24",
      "journal": "PLoS Computational Biology",
      "journal_title": "Modeling Mutual Exclusivity of Cancer Mutations",
      "journal_authors": "Ewa Szczurek, Niko Beerenwinkel",
      "journal_issue_pages": "10(3): e1003503",
      "journal_year": "2014",
      "journal_doi": "10.1371/journal.pcbi.1003503"
    },
    {
      "author": "Armin Töpfer, Tobias Marschall, Rowena A. Bull, Fabio Luciani, Alexander Schönhuth, Niko Beerenwinkel",
      "title": "Viral Quasispecies Assembly via Maximal Clique Enumeration",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 309-310, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "309-310",
      "proceedings_doi": "10.1007/978-3-319-05269-4_25",
      "journal": "PLoS Computational Biology",
      "journal_title": "Viral Quasispecies Assembly via Maximal Clique Enumeration",
      "journal_authors": "Armin Töpfer, Tobias Marschall, Rowena A. Bull, Fabio Luciani, Alexander Schönhuth, Niko Beerenwinkel",
      "journal_issue_pages": "10(3): e1003515",
      "journal_year": "2014",
      "journal_doi": "10.1371/journal.pcbi.1003515"
    },
    {
      "author": "Hua Wang, Heng Huang, Chris Ding",
      "title": "Correlated Protein Function Prediction via Maximization of Data-Knowledge Consistency",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 311-325, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "311-325",
      "proceedings_doi": "10.1007/978-3-319-05269-4_26",
      "journal": "Journal of Computational Biology",
      "journal_title": "Correlated Protein Function Prediction via Maximization of Data-Knowledge Consistency",
      "journal_authors": "Hua Wang, Heng Huang, Chris Ding",
      "journal_issue_pages": "22(6): 546-562",
      "journal_year": "2015",
      "journal_doi": "10.1089/cmb.2014.0172"
    },
    {
      "author": "Rui Wang and Scott C. Schmidler",
      "title": "Bayesian Multiple Protein Structure Alignment",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 326-339, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "326-339",
      "proceedings_doi": "10.1007/978-3-319-05269-4_27"
    },
    {
      "author": "Zhanyong Wang, Jae-Hoon Sul, Sagi Snir, Jose A. Lozano, Eleazar Eskin",
      "title": "Gene-Gene Interactions Detection Using a Two-Stage Model",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 340-355, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "340-355",
      "proceedings_doi": "10.1007/978-3-319-05269-4_28",
      "journal": "Journal of Computational Biology",
      "journal_title": "Gene–Gene Interactions Detection Using a Two-stage Model",
      "journal_authors": "Zhanyong Wang, Jae Hoon Sul, Sagi Snir, José A. Lozano, Eleazar Eskin",
      "journal_issue_pages": "22(6): 563-576",
      "journal_year": "2015",
      "journal_doi": "10.1089/cmb.2014.0163"
    },
    {
      "author": "Shutan Xu, Shuxue Zou, Lincong Wang",
      "title": "A Geometric Clustering Algorithm and Its Applications to Structural Data",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 356-370, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "356-370",
      "proceedings_doi": "10.1007/978-3-319-05269-4_29",
      "journal": "Journal of Computational Biology",
      "journal_title": "A Geometric Clustering Algorithm with Applications to Structural Data",
      "journal_authors": "Shutan Xu, Shuxue Zou, Lincong Wang",
      "journal_issue_pages": "22(5): 436-450",
      "journal_year": "2014",
      "journal_doi": "10.1089/cmb.2014.0162"
    },
    {
      "author": "Wen-Yun Yang, Farhad Hormozdiari, Eleazar Eskin, Bogdan Pasaniuc",
      "title": "A Spatial-Aware Haplotype Copying Model with Applications to Genotype Imputation",
      "proceedings_name": "Research in Computational Molecular Biology. RECOMB 2014. Lecture Notes in Computer Science, vol 8394, pp 371-384, Springer, Cham.",
      "proceedings_volume": "8394",
      "proceedings_pages": "371-384",
      "proceedings_doi": "10.1007/978-3-319-05269-4_30",
      "journal": "Journal of Computational Biology",
      "journal_title": "A Spatial Haplotype Copying Model with Applications to Genotype Imputation",
      "journal_authors": "Wen-Yun Yang, Farhad Hormozdiari, Eleazar Eskin, Bogdan Pasaniuc",
      "journal_issue_pages": "22(5): 451-462",
      "journal_year": "2014",
      "journal_doi": "10.1089/cmb.2014.0151"
    },
    {
      "author": "Y. William Yu, Deniz Yorukoglu, Bonnie Berger",
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      "journal": "Journal of Computational Biology",
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    {
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}