Fast and Simple Character Classes and Bounded Gaps Pattern Matching, With Application to Protein Searching
Large Scale Sequencing By Hybridization
Regulatory Element Detection Using Correlation with Expression
Rapid Significance Estimation in Local Sequence Alignment with Gaps
Analysis Techniques for Microarray Time-Series Data
Class Discovery in Gene Expression Data
On the Predictive Power of Sequence Similarity in Yeast
An Optimal Procedure for Gap Closing in Whole Genome Shotgun Sequencing
A Structural EM Algorithm for Phylogenetic Inference
A NMR-spectra-based Scoring Function for Protein Docking
Comparing Sequence Scaffolds
Fast Recovery of Evolutionary Trees With Thousands of Nodes
A Gibbs Sampling Method to Detect Over-represented Motifs in the Upstream Regions of Co-expressed Genes
Efficient Algorithms for Lateral Gene Transfer Problems
Applications of Generalized Pair Hidden Markov Models to Alignment and Gene Finding Problems
Predicting The Beta-Helix Fold From Protein Sequence Data
Geometric Algorithms for the Analysis of 2D-Electrophoresis Gels
Edit Distance between Two RNA Structures
Zinc Finger Gene Clusters and Tandem Gene Duplication
Algorithms for Phylogenetic Footprinting
Gene Functional Classification From Heterogenous Data
A New Approach to Fragment Assembly in DNA Sequencing
101 Optimal PDB Structure Alignments: a
Branch-and-Cut Algorithm for the Maximum Contact Map Overlap Problem
Algorithms for Identifying Protein Cross-links via Tandem Mass Spectrometry
A New Approach to Sequence Comparison: Normalized Sequence Alignment
Gene-Finding via Tandem Mass Spectrometry
Using Motion Planning to Study Protein Folding Pathways
The Greedy Path-Merging Algorithm for Sequence Assembly
Extracting Structural Information Using Time-Frequency Analysis of Protein NMR Data
DNA Segmentation as A Model Selection Process
Optimal Sequencing by Hybridization in Rounds
Finding Motifs Using Random Projections
Towards Predicting Coiled-Coil Protein Interactions
Context-Specific Bayesian Clustering for Gene Expression Data
Separating repeats in DNA sequence assembly