Friday, May 3 |
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Registration 8:00 AM - 6:00 PM Venue: Marvin Center, Lobby |
Saturday, May 4 |
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Registration 8:00 AM - 8:30 AM Venue: Marvin Center, Lobby |
Welcome and Introductory Remarks 8:30 AM - 8:50 AM Speakers: Gustavo Stolovitzky (IBM Research) and Laura Heiser (Oregon Health & Science University) Venue: Marvin Center, Room 308 |
precisionFDA-CPTAC Challenge |
Right data for right patient: the FDA-CPTAC multi-omics mislabeling challenge Speaker: Bing Zhang (Baylor College of Medicine) 8:50 AM - 9:10 AM Venue: Marvin Center, Room 308 |
Integrated Analysis of Multi-omics Data for Clinical Use [Best Performer Talk] Speaker: Renke Pan (Sentieon, Inc.) 9:10 AM - 9:30 AM Venue: Marvin Center, Room 308 |
Identifying Mislabeled Samples in Multi-omics Datasets [Best Performer Talk] Speaker: Anders Carlsson (Bionamic, Lund University) 9:30 AM - 9:50 AM Venue: Marvin Center, Room 308 |
Keynote The Challenge and Promise of Interpreting RNA Sequence to Unravel Tumor Mysteries Josh Stuart (UC Santa Cruz) 9:50 AM - 10:30 AM |
Coffee Break 10:30 AM - 11:00 AM Venue: Marvin Center, Room 309 |
SMC-RNA DREAM Challenge |
Overview of the DREAM SMC-RNA Isoform Quantification and Fusion Detection Challenge Speaker: Kyle Elrott (Oregon Health & Science University) 11:00 AM - 11:20 AM Venue: Marvin Center, Room 308 |
Arriba: a computational tool to detect gene fusions from next-generation sequencing data in personalized oncology [Best Performer Talk] Speaker: Sebastian Uhrig (DKFZ) 11:20 AM - 11:40 AM Venue: Marvin Center, Room 308 |
Fast and accurate cancer fusion transcript detection by STAR-Fusion [Best Performer Talk] Speaker: Brian Haas (Broad Instititue) 11:40 AM - 12:00 PM Venue: Marvin Center, Room 308 |
Lunch Break 12:00 PM - 1:20 PM |
Public Data Resources |
NCI Cancer Target Discovery and Development (CTD) Network: planned Challenges Speaker: Daniela S. Gerhard (Director of the NCI's Office of Cancer Genomics) 1:20 PM - 1:30 PM Venue: Marvin Center, Room 308 |
NCI Cancer Research Data Commons Speaker: Allen Dearry (NCI) 1:30 PM - 1:40 PM Venue: Marvin Center, Room 308 |
Generation and benchmarking of a 1000 Genomes gVCF resource for variant calling Speaker: Jonathan Pevsner (Krieger Institute and Johns Hopkins School of Medicine ) 1:40 PM - 2:00 PM Venue: Marvin Center, Room 308 |
Science Driven by Space Biology Omics Data Utilizing NASA GeneLab Platform Speaker: Afshin Beheshti (WYLE Labs, NASA Ames Research Center, NASA) 2:00 PM - 2:20 PM Venue: Marvin Center, Room 308 |
Indexing Massive NIH Datasets with NCBI-led Hackathons Speaker: Ben Busby (NCBI) 2:20 PM - 2:30 PM Venue: Marvin Center, Room 308 |
NCI CPTAC Big and Open Data Projects Speaker: Henry Rodriguez (NCI) 2:30 PM - 2:40 PM Venue: Marvin Center, Room 308 |
Utility of proteogenomics data in immunotherapy Speaker: Bing Zhang (Baylor College of Medicine) 2:40 PM - 3:00 PM Venue: Marvin Center, Room 308 |
Goals and Challenges of the NCI Human Tumor Atlas Network Speaker: Shannon Hughes (NCI) 3:00 PM - 3:10 PM Venue: Marvin Center, Room 308 |
Challenges and opportunities in the analysis of single-cell data generated from tumor specimens Speaker: Ken Lau (Vanderbilt University Medical Center) 3:10 PM - 3:30 PM Venue: Marvin Center, Room 308 |
Coffee Break 3:30 PM - 4:00 PM Venue: Marvin Center, Room 309 |
The Importance of Large and Systematic Perturbational Studies with LINCS program as an example Speaker: Ajay Pillai (NHGRI) 4:00 PM - 4:10 PM Venue: Marvin Center, Room 308 |
Integrative analysis of phenotypic and molecular responses to high-impact microenvironmental signals Speaker: Laura Heiser (Oregon Health & Science University) 4:10 PM - 4:30 PM Venue: Marvin Center, Room 308 |
Challenge Ideas Using Public Data Resources |
Preparation for Break Out Session 4:30 PM - 4:45 PM Venue: Marvin Center, Room 308 |
Break out Session: Brainstorm about Possible Challenge Ideas 4:45 PM - 5:30 PM Venue: Marvin Center, Ground Floor, G-08, G-12, and G-16 |
Report Back on the Breakout Sessions and Next Steps 5:30 PM - 6:00 PM Venue: Marvin Center, Room 308 |
Poster Session and Reception 6:00 PM - 8:00 PM Venue: Marvin Center, Room 309 |